{"loaderData":{"0":{"messages":{"dataset.datasetSearchTitle":"Dataset search","dataset.longType.OCCURRENCE":"Occurrence dataset","dataset.longType.CHECKLIST":"Checklist dataset","dataset.longType.SAMPLING_EVENT":"Sampling event","dataset.longType.METADATA":"Metadata dataset","dataset.metricHighlights.occurrences":"Occurrences","dataset.metricHighlights.withTaxonMatch":"With taxon match","dataset.metricHighlights.withCoordinates":"With coordinates","dataset.metricHighlights.withYear":"With year","dataset.metricHighlights.acceptedNames":"Accepted names","dataset.metricHighlights.synonyms":"Synonyms","dataset.noStatsForMetadata":"No statistics available for metadata only datasets","dataset.siteScopeSmallerThanDataset":"Not all records from the dataset are included on this site. Visit [GBIF.org]({datasetUrl}) to explore the full dataset.","dataset.viewArticle":"View article","dataset.registeredDate":"Registered {DATE}","dataset.constituentOf":"Constituent of","dataset.dataset":"Dataset","dataset.taxonomy":"Taxonomy","dataset.project":"Project","dataset.metrics":"Metrics","dataset.metricsOccurrenceHelpText":"Metrics are based on interpreted data","dataset.constituents":"Constituents","dataset.download":"Download","dataset.datasetHomepage":"Home page","dataset.nConstituentDatasets":"{NUMBER_FORMATED} {NUMBER, plural, one{constituent dataset} other{constituent datasets}}","dataset.consistuentDatasets":"Constituent datasets","dataset.noConstituentDatasets":"No constituent datasets","dataset.logs":"Logs","dataset.noDownloads":"No downloads yet","dataset.finished":"Finished","dataset.activity":"Activity","dataset.title":"Title","dataset.projectId":"Project ID","dataset.studyArea":"Study area","dataset.publishedBy":"Published by","dataset.mediatedBy":"Mediated by","dataset.description":"Description","dataset.metadataLanguage":"Metadata language","dataset.dataLanguage":"Data language","dataset.dataDescriptions":"External data descriptions","dataset.purpose":"Purpose","dataset.methodology":"Methodology","dataset.studyExtent":"Study extent","dataset.keywords":"Keywords","dataset.qualityControl":"Quality control","dataset.sampling":"Sampling","dataset.methodSteps":"Method steps","dataset.nDownloadEvents":"{NUMBER_FORMATED} {NUMBER, plural, one{download event} other{download events}}","dataset.nFromDataset":"{NUMBER_FORMATED} {NUMBER, plural, one{occurrence from this dataset} other{occurrences from this dataset}}","dataset.funding":"Funding","dataset.contacts":"Contacts","dataset.registration":"GBIF registration","dataset.dataDescription":"Data description","dataset.bibliography":"Bibliography","dataset.citation":"Citation","dataset.temporalCoverages":"Temporal scope","dataset.history":"History","dataset.ingestNow":"Ingest now","dataset.readFullDescription":"More","dataset.howToCite":"How to cite","dataset.geographicCoverages":"Geographic scope","dataset.taxonomicCoverages":"Taxonomic scope","dataset.coverage":"Coverage","dataset.additionalInfo":"Additional info","dataset.publishingCountriesAreas":"Publishing countries and areas","dataset.originalArchive":"Source archive","dataset.originalArchiveDescription":"The source archive is the data as published to GBIF without any normalization or processing via GBIF.","dataset.checklistBankDownload":"Download from ChecklistBank","dataset.checklistBankDownloadDescription":"This archived comes to GBIF via ChecklistBank. ChecklistBank provides multiple download formats as well as options to filter checklists before downloading.","dataset.annotatedEml":"GBIF annotated metadata","dataset.license":"Licence","dataset.recommended":"Recommended","dataset.processedOccurrences":"GBIF annotated occurrence archive","dataset.processedOccurrencesDescription":"Download the occurrence records after GBIF processing. During processing, names, dates etc are normalised. The data is also enriched with information from other sources.\n\nBe aware that an account is needed to download the content.","dataset.noDescriptionProvided":"No description available","dataset.pNetwork":"{NUMBER, plural, one{Network} other{Networks}}","dataset.parentEvent":"Parent event","dataset.eventDescription":"Event description","dataset.siblingEvents":"Sibling events","dataset.childEvents":"Child events","dataset.events":"Events","dataset.boundingBox":"Bounding box","dataset.latitude":"Latitude","dataset.longitude":"Longitude","dataset.verbatim":"Verbatim","dataset.occurrenceCount":"Occurrence count","dataset.inDataset":"In","dataset.samplingArticleLink":"More about sampling events on GBIF.org","dataset.includesDna":"Includes DNA","dataset.includesDnaDescription":"There are records in this dataset that contain sequence data.","dataset.containsSamplingEvents":"Contains sampling events","dataset.containsSamplingEventsDescription":"This dataset contains sampling data. Details on the sampling method appear in the methodology section of the dataset description.","dataset.griddedData":"Gridded data","dataset.griddedDataDescription":"Based on our analysis of the records, this dataset likely contains gridded data. Read more in this [blog post about gridded datasets](https://data-blog.gbif.org/post/gridded-datasets-update/).","dataset.registry.failedSinceSuccess":"Failed attempts since last successful ingestion","dataset.registry.lastFailed":"Last failed attempt","dataset.registry.registrationDate":"Registration date","dataset.registry.lastSuccess":"Last successful ingestion","dataset.registry.lastWithChange":"Last ingestion with changes","dataset.registry.noEntries":"This dataset has no ingestion entries","dataset.registry.lastWithDataChange":"Last ingestion with data change","dataset.registry.occInLastIngestion":"Occurrences in last ingestion","dataset.registry.completionReasons":"Ingestion completion reasons","dataset.registry.unfinished":"Unfinished ingestions","dataset.registry.total":"Ingestions in total","dataset.registry.endpoints":"Endpoints","dataset.registry.installationContacts":"Installation contacts","dataset.registry.installation":"Installation","dataset.registry.dataLastChanged":"Data last changed","dataset.registry.pubDate":"Publication date","dataset.registry.hostedBy":"Hosted by","dataset.registry.hostingStatus":"Hosting status","dataset.registry.metdataLastModified":"Metadata last modified","dataset.registry.preferredIdentifier":"Preferred identifier","dataset.registry.alternativeIdentifier":"Alternative identifiers","dataset.registry.ORPHANED":"Orphaned dataset","dataset.registry.RESCUED":"Rescued orphan dataset","dataset.registry.ADOPTED":"Adopted dataset","dataset.registry.neverIngested":"Never ingested","dataset.registry.inIngestionQueue":"Is in ingestion queue","dataset.registry.addingToQueue":"Adding to queue","dataset.registry.unableToStart":"Unable to start ingestion","dataset.registry.ingestionChartExplainer":"Most recent ingestions. Top left is the latest.","dataset.registry.ingestionStatus":"Ingestion status","dataset.registry.itemInIngestionQueue":"Items in ingestion queue","dataset.registry.datasetIngestionStatus":"Dataset ingestion status","dataset.registry.gbifIngestionStatus":"GBIF ingestion status","dataset.registry.lastIngestionSuccess":"Last ingestion successful","dataset.registry.lastIngestionFailed":"Last ingestion failed","dataset.registry.outOfSync":"Out of sync","dataset.registry.becauseTrustedContact":"Because you are trusted contact","dataset.registry.registrationDetails":"GBIF registration details","apiHelp.example":"Example","apiHelp.examples":"Examples","apiHelp.singleEntry":"Get a single entry.","apiHelp.singleOccurrence":"Get a single occurrence.","apiHelp.searchOccurrences":"Get all occurrences.","apiHelp.searchOccurrencesExample":"First 5 occurrences of taxon 9778871 (Flabellina McMurtrie, 1831) that have been recorded in May between year 2000-2024.","apiHelp.relatedOccurrences":"Related occurrences (experimental).","apiHelp.occurrenceFragment":"Record before interpretation.","apiHelp.singleInstallation":"Get a single installation.","apiHelp.singleOrganization":"Get a single publisher.","apiHelp.searchOrganizations":"Search for publishers.","apiHelp.searchInstallations":"Search for installations.","apiHelp.search":"Search","apiHelp.singleNetwork":"Get a single network.","apiHelp.singleCollection":"Get a single collection.","apiHelp.searchCollections":"Search for collections.","apiHelp.singleInstitution":"Get a single institution.","apiHelp.searchInstitutions":"Search for institutions.","apiHelp.singleDataset":"Get a single dataset.","apiHelp.searchDatasetsExample":"First 2 dataset published from Denmark with free text \"fungi\" in the title or description.","apiHelp.searchExample":"First 2 with free text \"dna\".","apiHelp.searchDatasets":"Get all datasets.","publisher.searchTitle":"Publisher search","publisher.tabs.aboutPublisher":"About","publisher.tabs.metrics":"Metrics","publisher.tabs.publishersHomepage":"Home page","publisher.joinedDate":"Joined {date}","publisher.newPublisher":"New publisher","publisher.technicalContact":"Technical contact","publisher.country":"Country or area","publisher.hosting":"Hosting","publisher.description":"Description","publisher.endorsedBy":"Endorsed by","publisher.notYetEndorsed":"Not yet endorsed","publisher.pendingEndorsementBy":"Pending endorsement by","publisher.endorsementWithheld":"Endorsement withheld","publisher.installations":"Installations","publisher.getDownloadReport":"Download activity report","publisher.contacts":"Contacts","publisher.administrativeContact":"Administrative contact","publisher.header.publisher":"Publisher","publisher.header.sinceDate":"Since {DATE}","collection.institutionUnknown":"Institution is unknown","collection.contentTypes":"Content types","collection.preservationTypes":"Preservation types","collection.personalCollection":"Personal collection","collection.accessionStatus":"Accession status","collection.numberSpecimens":"Number of specimens in collection","collection.collectionDescriptors":"Collection descriptors","installation.installation":"Installation","installation.about":"About","installation.homepage":"Home page","installation.installationType":"Installation type","installation.hostedBy":"Hosted by","installation.registered":"Registered","installation.endpoints":"Endpoints","network.network":"Network","network.tabs.summary":"Summary","network.tabs.metrics":"Metrics","network.tabs.datasets":"Datasets","network.tabs.publishers":"Publishers","grscicoll.foundingDate":"Founding date","grscicoll.geographicDescription":"Geographic description","grscicoll.taxonomicDescription":"Taxonomic description","grscicoll.temporalDescription":"Temporal description","grscicoll.additionalNames":"Additional names","grscicoll.description":"Description","grscicoll.code":"Code","grscicoll.name":"Name","grscicoll.active":"Active","grscicoll.activeInstitution":"Active","grscicoll.activeCollection":"Active","grscicoll.inactive":"Inactive","grscicoll.inactiveInstitution":"Inactive","grscicoll.inactiveCollection":"Inactive","grscicoll.alternativeCodes":"Alternative codes","grscicoll.apiUrl":"URL for Collection's Web Services","grscicoll.catalogUrl":"Online Catalog/Database","grscicoll.homepage":"Homepage","grscicoll.phone":"Phone number","grscicoll.email":"Email","grscicoll.fax":"Fax number","grscicoll.mailingAddress":"Mailing address","grscicoll.physicalAddress":"Physical address","grscicoll.contacts":"Contacts","grscicoll.address":"Address","grscicoll.province":"State/Province","grscicoll.postalCode":"Postal/Zip Code","grscicoll.city":"City/Town","grscicoll.country":"Country","grscicoll.logoUrl":"Logo","grscicoll.notes":"Notes","grscicoll.collectionCode":"Collection code","grscicoll.institutionCode":"Institution code","grscicoll.specimensViaGbif":"Specimen records shared with GBIF","grscicoll.specimens":"Specimens","grscicoll.identifiers":"Identifiers","grscicoll.importantCollectors":"Important collectors","grscicoll.incorporatedCollections":"Incorporated collections","grscicoll.unknownSize":"Unknown size","grscicoll.dashboard":"Dashboard","grscicoll.dataCatalog":"Data catalog","grscicoll.edit":"Edit","grscicoll.editHelpText":"No login required","grscicoll.githubHelpText":"Leave a comment - requires a Github account","grscicoll.entryCreated":"Entry created","grscicoll.lastModified":"Last modified","grscicoll.modifiedBy":"Modified by","grscicoll.masterSource":"Master source","grscicoll.fromInstitution":"From {institution}","grscicoll.tabs.about":"About","grscicoll.tabs.explore":"Explore catalog","grscicoll.citesPermitNumber":"Cites permit number","grscicoll.collectionDescriptorsHeadline":"Collection descriptors","grscicoll.collectionDescriptorsIntroduction":"Collection descriptors allows a collection to be described in more detail. This can be useful for collections that are not yet digitized or for collections that have specific characteristics that are not covered by the standard collection metadata.","grscicoll.collectionSearchNoResultsMessage":"Collection metadata are often high level and not exhaustive. Consider broadening your scope or try searching for digitized specimens.","grscicoll.searchForSpecimens":"Search for specimens","institution.institutionalGovernance":"Institutional governance","institution.type":"Institution Type","institution.addCollection":"Add collection","institution.disciplines":"Institutional disciplines","institution.numberSpecimens":"Number of specimens in institution","institution.unknownCollectionCodesForInstitution":"These unknown collection codes are linked to this institution","catalogues.occurrences":"Occurrences","catalogues.datasets":"Datasets","catalogues.species":"Species","catalogues.publishers":"Publishers","catalogues.literature":"Literature","catalogues.collections":"Collections","catalogues.institutions":"Institutions","tableHeaders.features":"Features","tableHeaders.citations":"Citations","tableHeaders.occurrences":"Occurrences","tableHeaders.numberSpecimens":"Number of specimens","tableHeaders.gbifNumberSpecimens":"Specimens in GBIF","tableHeaders.title":"Title","tableHeaders.titleAndAbstract":"Title and abstract","tableHeaders.altmetric":"Altmetric","tableHeaders.registered":"Registered","tableHeaders.hostedDatasets":"Hosted datasets","tableHeaders.pubDatasets":"Published datasets","tableHeaders.species":"Number of species","tableHeaders.parents":"Parents","tableHeaders.institution":"Institution","tableHeaders.collection":"Collection","tableHeaders.collectionCount":"Collections","tableHeaders.active":"Is active","tableHeaders.activeInstitution":"Is active","tableHeaders.activeCollection":"Is active","intervals.description.lt":"Less than {to}","intervals.description.lte":"Less or equal {to}","intervals.description.gt":"Greater than {from}","intervals.description.gte":"Greater or equal {from}","intervals.description.e":"Equals {from}","intervals.description.between":"From {from} to {to}","intervals.compact.between":"{from} to {to}","intervals.compact.lt":"Below {to}","intervals.compact.gt":"Above {from}","intervals.compact.e":"{from}","intervals.compactMeters.between":"{from}m to {to}m","intervals.compactMeters.lt":"Below {to}m","intervals.compactMeters.gt":"Above {from}m","intervals.compactMeters.e":"{from}m","intervals.compactTime.between":"{from} to {to}","intervals.compactTime.lt":"Before {to}","intervals.compactTime.gt":"After {from}","intervals.compactTime.e":"{from}","intervals.year.between":"Year {from} to {to}","intervals.year.lt":"Before year {to}","intervals.year.gt":"After year {from}","intervals.year.e":"Year is {from}","intervals.coordinateUncertainty.between":"Coordinate uncertainty {from}m to {to}m","intervals.coordinateUncertainty.lt":"Coordinate uncertainty below {to}m","intervals.coordinateUncertainty.gt":"Coordinate uncertainty above {from}m","intervals.coordinateUncertainty.e":"Coordinate uncertainty is {from}m","intervals.depth.between":"Depth {from} to {to}","intervals.depth.lt":"Depth below {to}","intervals.depth.gt":"Depth above {from}","intervals.depth.e":"Depth is {from}","intervals.organismQuantity.between":"Organism quantity {from} to {to}","intervals.organismQuantity.lt":"Organism quantity below {to}","intervals.organismQuantity.gt":"Organism quantity above {from}","intervals.organismQuantity.e":"Organism quantity is {from}","intervals.sampleSizeValue.between":"Sample size value {from} to {to}","intervals.sampleSizeValue.lt":"Sample size value below {to}","intervals.sampleSizeValue.gt":"Sample size value above {from}","intervals.sampleSizeValue.e":"Sample size value is {from}","intervals.relativeOrganismQuantity.between":"Relative organism quantity {from} to {to}","intervals.relativeOrganismQuantity.lt":"Relative organism quantity below {to}","intervals.relativeOrganismQuantity.gt":"Relative organism quantity above {from}","intervals.relativeOrganismQuantity.e":"Relative organism quantity is {from}","intervals.elevation.between":"Elevation {from} to {to}","intervals.elevation.lt":"Elevation below {to}","intervals.elevation.gt":"Elevation above {from}","intervals.elevation.e":"Elevation is {from}","intervals.geoDistance.short":"Within {distance} of {latitude},{longitude}","intervals.geoDistance.description":"Latitude {latitude}, longitude: {longitude}, distance: {distance}","intervals.units.name.km":"kilometres","intervals.units.name.m":"metres","intervals.units.name.mi":"miles","intervals.units.name.ft":"feet","filters.dwcaExtension.name":"DWCA extension","filters.dwcaExtension.count":"{num, plural, one { DWCA extension } other {# DWCA extensions}}","filters.dwcaExtension.description":"A short description of the component should be placed here","filters.locationId.name":"Location ID","filters.locationId.count":"{num, plural, one { Location ID } other {# Location IDs}}","filters.locationId.description":"Publishers can choose to assign IDs to the location. This field is not normalized, meaning that you search data as provided by the publisher.","filters.hasCoordinate.name":"Has coordinate","filters.hasCoordinate.count":"Has coordinates","filters.hasCoordinate.description":"Whether the record has coordinates.","filters.hasGeospatialIssues.name":"Has geospatial issues","filters.hasGeospatialIssues.count":"Has geospatial issues","filters.hasGeospatialIssues.description":"Whether the record has geospatial issues.","filters.collectionKey.name":"Collection","filters.collectionKey.count":"{num, plural, one {# collection } other {# collections}}","filters.collectionKey.description":"The collection in GrSciColl this record was matched to","filters.taxonomicStatus.name":"Status","filters.taxonomicStatus.count":"{num, plural, one { status } other {# statuses}}","filters.taxonomicStatus.description":"The number of held specimens stated in the description. This number does not reflect how many records have been digitized and shared.","filters.taxonRank.name":"Rank","filters.taxonRank.count":"{num, plural, one { rank } other {# ranks}}","filters.taxonRank.description":"The number of held specimens stated in the description. This number does not reflect how many records have been digitized and shared.","filters.numberSpecimens.name":"Number of specimens","filters.numberSpecimens.count":"{num, plural, one { specimen count } other {# Specimen counts filters}}","filters.numberSpecimens.description":"The number of held specimens stated in the description. This number does not reflect how many records have been digitized and shared.","filters.specimensInGbif.name":"Specimens in GBIF","filters.specimensInGbif.count":"{num, plural, one { GBIF specimen count } other {# specimens in GBIF}}","filters.specimensInGbif.description":"Number of specimen records published on GBIF and linked to the institution entry.","filters.iucnRedListCategory.name":"IUCN Global Red List Category","filters.iucnRedListCategory.count":"{num, plural, one { IUCN Global Red List category } other {# IUCN Global Red List categories}}","filters.iucnRedListCategory.description":"The IUCN Red List of Threatened Species groups taxa by how threatened they are.","filters.geoDistance.name":"Distance from coordinates","filters.geoDistance.count":"{num, plural, one { filter } other {# filters }}","filters.geoDistance.description":"Filter on records within a given distance from a point","filters.geoDistance.placeholderLat":"Latitude","filters.geoDistance.placeholderLon":"Longitude","filters.geoDistance.placeholderDist":"Distance","filters.geometry.name":"Location","filters.geometry.count":"{num, plural, one { filter } other {# filters }}","filters.geometry.description":"Filter on records within a given geometric area. The area can be a point, a line, a polygon, or a bounding box.","filters.geometry.placeholderLat":"Latitude","filters.geometry.placeholderLon":"Longitude","filters.geometry.placeholderDist":"Distance","filters.relevance.name":"Relevance","filters.relevance.count":"{num, plural, one { relevance } other {# relevance filters}}","filters.relevance.description":"How is GBIF used in the literature.","filters.topics.name":"Topic","filters.topics.count":"{num, plural, one { topic } other {# topics}}","filters.topics.description":"What are the topics of the record.","filters.audiences.name":"Audience","filters.audiences.count":"{num, plural, one { audience } other {# audiences}}","filters.audiences.description":"Who are the audiences for the resource.","filters.purposes.name":"Topic","filters.purposes.count":"{num, plural, one { purpose } other {# purposes}}","filters.purposes.description":"What are the purposes of the resource.","filters.eventDate.name":"Event date","filters.eventDate.count":"{num, plural, one {# event date } other {# event dates}}","filters.eventDate.description":"When was the record collected or observed.","filters.alternativeCode.name":"Alternative code","filters.alternativeCode.count":"{num, plural, one {# alternative code } other {# alternative codes}}","filters.alternativeCode.description":"Any additional code that is already in use for the same record in other contexts (for example, historical codes).","filters.identifier.name":"Identifier","filters.identifier.count":"{num, plural, one {# identifier } other {# identifiers}}","filters.identifier.description":"A short description of the component should be placed here","filters.institutionType.name":"Type","filters.institutionType.count":"{num, plural, one {# type } other {# types}}","filters.institutionType.description":"Institution type (museum, herbarium, etc.)","filters.discipline.name":"Discipline","filters.discipline.count":"{num, plural, one {# discipline } other {# disciplines}}","filters.discipline.description":"The research disciplines the the institution houses.","filters.collectionContentType.name":"Content type","filters.collectionContentType.count":"{num, plural, one {# content type } other {# content types}}","filters.collectionContentType.description":"The type of objects available in the collection","filters.preservationType.name":"Preservation type","filters.preservationType.count":"{num, plural, one {# preservation type } other {# preservation types}}","filters.preservationType.description":"The method used to preserve the objects available in the collection","filters.taxonKey.name":"Scientific name","filters.taxonKey.count":"{num, plural, one {scientific name} other {# scientific names}}","filters.taxonKey.description":"The scientific name as it appears in the GBIF backbone taxonomy. These names are normalized to ease search across datasets. It is possible that an originally-provided name might be misinterpreted or unknown. To search the names as provided use the \"Verbatim scientific name\" filter.","filters.taxonKeyGrSciColl.name":"Scientific name","filters.taxonKeyGrSciColl.count":"{num, plural, one {scientific name} other {# scientific names}}","filters.taxonKeyGrSciColl.description":"Filter using the scientific names listed in the collection descriptors provided in the collection's metadata, noting that not all collections include metadata descriptors and the names are often at higher taxonomic ranks such as order or family.","filters.basisOfRecord.name":"Basis of record","filters.basisOfRecord.count":"{num, plural, one {basis of record} other {# bases of records}}","filters.basisOfRecord.isNotNull":"Has a basis of record","filters.basisOfRecord.isNull":"Has no basis of record","filters.basisOfRecord.description":"The nature of the evidence upon which the record is based.","filters.institutionCode.name":"Institution code","filters.institutionCode.count":"{num, plural, one {institution code} other {# institution codes}}","filters.institutionCode.description":"The code (or acronym) for the institution having custody of the object(s) or information referred to in the record.","filters.catalogNumber.name":"Catalogue number","filters.catalogNumber.count":"{num, plural, one { catalogue number } other {# catalogue numbers}}","filters.catalogNumber.description":"The identifier for the record within a catalogue or collection.","filters.mediaType.name":"Media type","filters.mediaType.count":"{num, plural, one {media type} other {# media types}}","filters.mediaType.description":"The types of media accessible for this record.","filters.occurrenceIssue.name":"Issues and flags","filters.occurrenceIssue.count":"{num, plural, one {issue or flag} other {# issues and flags}}","filters.occurrenceIssue.isNotNull":"Has issues","filters.occurrenceIssue.isNull":"Has no issues","filters.occurrenceIssue.description":"The types of issues or flags of potential interest discovered in processing the data.","filters.occurrenceCountry.name":"Country or area","filters.occurrenceCountry.count":"{num, plural, one {country or area} other {# countries or areas}}","filters.occurrenceCountry.description":"The country or territory where the event occurred","filters.grsciCollCountry.description":"Country or territory in the record's address","filters.preparations.name":"Preparations","filters.preparations.count":"{num, plural, one {# preparation} other {# preparations}}","filters.preparations.description":"How the specimen has been prepared (e.g. dried)","filters.publishingCountryCode.name":"Publishing country or area","filters.publishingCountryCode.count":"{num, plural, one {publishing country or area} other {# publishing countries or areas}}","filters.publishingCountryCode.description":"The ISO code for the country or territory in which the data publisher is located","filters.q.name":"Text search","filters.q.count":"{num, plural, one {text string} other {# search strings}}","filters.q.description":"Free text search across several fields","filters.coordinates.name":"Coordinates","filters.elevation.name":"Elevation","filters.elevation.count":"{num, plural, one {elevation filter} other {# elevation filters}}","filters.elevation.description":"The distance above a vertical reference point (usually mean sea level or a geoid) in metres.","filters.license.name":"Licence","filters.license.count":"{num, plural, one {licence} other {# licences}}","filters.license.description":"The legal licence or waiver under which the record is shared.","filters.datasetKey.name":"Dataset","filters.datasetKey.count":"{num, plural, one {dataset} other {# datasets}}","filters.datasetKey.description":"The title of the dataset under which the record is shared.","filters.publisherKey.name":"Publisher","filters.publisherKey.count":"{num, plural, one {publisher} other {# publishers}}","filters.publisherKey.description":"The name of the organization responsible for sharing the dataset in which the record is included.","filters.gbifPublisherKey.name":"GBIF publisher","filters.gbifPublisherKey.count":"{num, plural, one {GBIF publisher} other {# GBIF publishers}}","filters.gbifPublisherKey.description":"The name of the organization responsible for sharing the dataset in which the record is included.","filters.hostingOrganizationKey.name":"Hosting organization","filters.hostingOrganizationKey.count":"{num, plural, one {host} other {# hosts}}","filters.hostingOrganizationKey.description":"The name of the organization hosting the dataset in which the record is published.","filters.country.name":"Country or area","filters.country.count":"{num, plural, one {country or area} other {# countries or areas}}","filters.countriesOfCoverage.name":"Country or area of coverage","filters.countriesOfCoverage.count":"{num, plural, one {country or area of coverage} other {# countries or area of coverage}}","filters.countriesOfCoverage.description":"What countries are covered by the record.","filters.collectionDescriptorCountry.name":"Country or area of coverage","filters.collectionDescriptorCountry.count":"{num, plural, one {country or area of coverage} other {# countries or area of coverage}}","filters.collectionDescriptorCountry.description":"What countries does the collection have specimens from. Notice that not all collections have this information filled.","filters.countriesOfResearcher.name":"Country or area of researcher","filters.countriesOfResearcher.count":"{num, plural, one {country or area of researcher} other {# countries or areas of researchers}}","filters.typeStatus.name":"Type status","filters.typeStatus.count":"{num, plural, one {type status} other {# type statuses}}","filters.typeStatus.isNotNull":"Has a type status","filters.typeStatus.isNull":"The type status","filters.typeStatus.description":"The type designation of a specimen.","filters.year.name":"Year","filters.year.count":"{num, plural, one {year filter} other {# year filters}}","filters.year.description":"The year in which the event occurred.","filters.sampleSizeUnit.name":"Sample size unit","filters.sampleSizeUnit.count":"{num, plural, one {sample size unit} other {# sample size units}}","filters.sampleSizeUnit.description":"The unit of measurement for the \"sample size value\".","filters.coordinateUncertainty.name":"Coordinate uncertainty","filters.coordinateUncertainty.count":"{num, plural, one {Coordinate uncertainty} other {# coordinate uncertainty filters}}","filters.coordinateUncertainty.description":"A measure of the minimum distance in metres from a coordinate within which a locality might be interpreted to be.","filters.depth.name":"Depth","filters.depth.count":"{num, plural, one { depth } other {# depths}}","filters.depth.description":"The distance below a local surface, in metres.","filters.organismQuantity.name":"Organism quantity","filters.organismQuantity.count":"{num, plural, one { organism quantity } other {# organism quantitys}}","filters.organismQuantity.description":"The value for the quantity of organisms, where the type of measurement is given in the \"Organism quantity type\".","filters.sampleSizeValue.name":"Sample size value","filters.sampleSizeValue.count":"{num, plural, one { sample size value } other {# sample size values}}","filters.sampleSizeValue.description":"The value for the size of a sample, where the units of measurement are given in the \"Sample size unit\".","filters.relativeOrganismQuantity.name":"Relative organism quantity","filters.relativeOrganismQuantity.count":"{num, plural, one { relative organism quantity } other {# relative organism quantities}}","filters.relativeOrganismQuantity.description":"The amount of biological material relative to the size of a sample, calculated as organismQuantity per sampleSize when the organismQuantityType and sampleSizeUnit are unambiguous.","filters.month.name":"Month","filters.month.count":"{num, plural, one { month } other {# months}}","filters.month.description":"The integer month in which the event occurred.","filters.continent.name":"Continent","filters.continent.count":"{num, plural, one { continent } other {# continents}}","filters.continent.description":"The name of the continent in which the location occurs. This field is not inferred but only populated if provided by the dataset publisher. Applying this filter may exclude relevant records.","filters.protocol.name":"Publishing protocol","filters.protocol.count":"{num, plural, one { protocol } other {# protocols}}","filters.protocol.description":"The technical protocol through which the dataset is shared.","filters.establishmentMeans.name":"Establishment means","filters.establishmentMeans.count":"{num, plural, one { establishment means } other {# establishment means}}","filters.establishmentMeans.description":"The means by which the organism was introduced to a given place at a given time.","filters.recordedBy.name":"Recorded by","filters.recordedBy.count":"{num, plural, one { recorded by } other {# recorded bys}}","filters.recordedBy.description":"The names of the person, people, groups or organizations responsible for recording the original occurrence.","filters.recordNumber.name":"Record number","filters.recordNumber.count":"{num, plural, one { record number } other {# record numbers}}","filters.recordNumber.description":"An identifier given to the occurrence at the time it was recorded.","filters.collectionCode.name":"Collection code","filters.collectionCode.count":"{num, plural, one { collection code } other {# collection codes}}","filters.collectionCode.description":"What collection code is assigned to the record.","filters.projectId.name":"Project ID","filters.projectId.count":"{num, plural, one { project ID } other {# project IDs}}","filters.projectId.description":"What project ID is associated with the record.","filters.recordedById.name":"Recorded by ID","filters.recordedById.count":"{num, plural, one { recorded by ID } other {# recorded by IDs}}","filters.recordedById.description":"The identifier for the person, people, groups or organizations responsible for recording the original occurrence.","filters.identifiedById.name":"Identified by ID","filters.identifiedById.count":"{num, plural, one { identified by id } other {identified by #}}","filters.identifiedById.description":"The identifier for the person, people, groups or organizations responsible for determining the scientific name of the organism.","filters.occurrenceId.name":"Occurrence id","filters.occurrenceId.count":"{num, plural, one { occurrence ID } other {# occurrence IDs}}","filters.occurrenceId.description":"The unique identifier for the occurrence record.","filters.organismId.name":"Organism id","filters.organismId.count":"{num, plural, one { organism ID } other {# organism IDs}}","filters.organismId.description":"The unique identifier for the organism in the record.","filters.locality.name":"Locality","filters.locality.count":"{num, plural, one { locality } other {# localities}}","filters.locality.description":"The specific part of the description of the place.","filters.waterBody.name":"Water body","filters.waterBody.count":"{num, plural, one { water body } other {# water bodies}}","filters.waterBody.description":"The name of the water body in which the location occurs.","filters.higherGeography.name":"Higher geography","filters.higherGeography.count":"{num, plural, one { water body } other {# higher geography}}","filters.higherGeography.description":"Higher geography in which the record is located. This is not an interpreted field, but the original data as provided by the publisher. Multiple values can be provided.","filters.stateProvince.name":"State province","filters.stateProvince.count":"{num, plural, one { state province } other {# state provinces}}","filters.stateProvince.description":"The name of the next administrative region smaller than country in which the location occurs.","filters.eventId.name":"Event ID","filters.eventId.count":"{num, plural, one { event ID } other {# event IDs}}","filters.eventId.description":"The unique identifier for the event in the record.","filters.eventID.name":"Event ID","filters.eventID.count":"{num, plural, one { event ID } other {# event IDs}}","filters.eventID.description":"The unique identifier for the event in the record.","filters.parentEventId.name":"Parent event ID","filters.parentEventId.count":"{num, plural, one { event ID } other {# event IDs}}","filters.parentEventId.description":"The unique identifier for the Parent Event in the record.","filters.locationID.name":"Location ID","filters.locationID.count":"{num, 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If you have a large GeoJSON file, you can simplify it using [MapShaper](http://mapshaper.org/) and convert to WKT using [geojson.io](http://geojson.io/). Notice that only POINT, LINESTRING, LINEARRING, POLYGON and MULTIPOLYGON are accepted WKT types.","filterSupport.location.simplificationWarning":"We can try to simplify the geometry, but this might lead to self-intersections or otherwise invalid geometries. 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However, generating biodiversity data based on traditional…","status":"CLOSED","start":"2021-09-02","end":"2023-02-28","fundsAllocated":17981,"primaryLink":null,"programme":{"__typename":"Programme","fundingOrganisations":[{"id":"82633","title":"Ministry of the Environment, Government of Japan","url":"https://www.env.go.jp/en","logo":{"title":"Ministry of the Environment, Government of Japan","file":{"url":"//images.ctfassets.net/uo17ejk9rkwj/2xDVudktwY28CwCeyKAQgw/3e4cb8bc1e1010307bf6b08d5d3675a8/moej-logotype.png"}},"__typename":"FundingOrganisation"}],"id":"82629","title":"BIFA: Biodiversity Information Fund for Asia"},"overrideProgrammeFunding":null,"projectId":"BIFA6_030","body":"

River microbes have great potential for assessment and monitoring of biodiversity and environmental conditions in freshwater ecosystems. However, generating biodiversity data based on traditional sampling and morphological identification is time-consuming and error-prone. Recently, metabarcoding of environmental DNA (eDNA) technique offers novel opportunities. It is a non-invasive, cost-effective method to assess biodiversity and bioindicators accurately with the aid of advanced next-generation sequencing (NGS) and high-throughput sequencing (HTS) technologies.

However, the metabarcoding studies and eDNA data in Mekong River are scarce. The goal of this project is to promote the use of data on microbial biodiversity in river monitoring and conservation through a series of training workshops and the construction of an integrated data platform for collecting, managing and sharing eDNA biodiversity data.

The project team will compile eDNA data (primarily bacterial 16S rDNA and fungal ITS metabarcoding data) from studies into a database of Mekong River’s microbial communities. The main original source of eDNA data used in this project will be derived from the MekongDNA Project led by Dr Supawadee Ingsriswang of the National Center for Genetic Engineering and Biotechnology (BIOTEC) in Thailand. The resulting database will be incorporated into a web-based platform.

Moreover, in order to facilitate data use and sharing in scientific communities, the biodiversity data and metadata of the project can be accessed via API which enables automated data sharing between relevant biodiversity databases such as AmiBase. The mobilization of Mekong eDNA data will have implications in sustainable development in research communities and general public.

Project progress

This project has analyzed environmental-DNA (eDNA) metabarcode sequence data from the Mekong River's water. The bacterial diversity derived from 16S rRNA metabarcode sequence data showed more than 10,000 occurrences of identified bacteria in the Mekong River samples collected during March - December 2021.

At final reporting, the project published these results on GBIF as an occurrence dataset comprising 12,614 records, as well as its accompanying sampling event dataset.

In order to achieve the goal of sharing the eDNA-derived biodiversity information of microorganisms in Mekong river, the metabarcode sequence data were also deposited to NCBI Bioproject database. The diversity and occurrence datasets have also been integrated to AmiBase system and the data sharing API was developed at (https://amibase.org/api.php).

During project implementation and to raise awareness of importance of eDNA data for Mekong biodiversity study and conservation in local communities around Mekong river, four eDNA data analysis and data mobilization workshops have been conducted in January 2022, March 2022, June 2022 and October 2022 respectively. The 4th and final workshop being conducted in conjunction with the WDCM global training course: ASEAN satellite training course and held as a hybrid seminar including onsite and online sessions. These events attracted a total of 250 participants including a variety of audience from university students, lecturers, researchers, and R&D personnels in private sectors. The success of these workshop activities hopefully paving the foundation of an eDNA-based diversity study network in Thailand.

In addition to this and to increase project visibility, project workshop activity has been publicized on the MekongDNA’s Citizen Science program website. Project news and information has also posted to social networks such as TBRCNetwork Facebook page, for example the news post to announce the start of the project and the news post to summarize the success of the 4th workshop and seminar.

Due to the COVID-19 pandemic the project team experienced some delays in workshop events and had lower attendance rates than expected. In response to participant’s requests for the expansion of the workshop to live online events, the project team were able to address this and conduct its 4th workshop and seminar as a hybrid event.

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Somsak Likhitrattanapisal
National Center for Genetic Engineering and Biotechnology
113 Thailand Science Park Paholyothin Rd., Khlong Neung, Khlong Luang, Pathum Thani
12120 Pathum Thani
Thailand

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Using microbial metabarcoding to monitor biodiversity and bioindicators in the Mekong RiverClosed