Occurrence dataset Registered March 23, 2023

    Nansen Legacy Bacterial and Archaeal community composition

    Description

    The bacterial and archaeal community composition based on 16S rRNA metabarcoding of seawater samples taken along the transect of the Nansen Legacy project (https://www.wikidata.org/wiki/Q110857128) from 2018 to 2021. The samples contain 7 datasets from different cruises at different time points. From the samples the DNA was extracted and then used for 16S rRNA gene sequencing using the standard Earth Microbiome Project primers (515F and 806R) and Illumina MiSeq paired end sequencing. The raw sequences were run using the DADA2 pipeline (Callahan et al., 2016) and then cleaned for samples with under a total of 10000 sequences and ASVs with less than a total of 3 sequences per sequencing run or 0.0001% relative abundance.

    Geographic scope

    Description

    Northern Barents Sea, east of Svalbard, Norway.

    Latitude
    From 75.996 to 82.092
    Longitude
    From 28.504 to 34.274

    Temporal scope

    range
    August 01, 2018 - August 31, 2021

    Taxonomic scope

    Description

    Bacteria and Archaea based on 16S rRNA gene sequence.

    Coverage
    Bacteria and Archaea

    Methodology

    Sampling

    Please refer to the Nansen Legacy Sampling Protocol: https://arvenetternansen.com/sampling-protocol-collection/

    Study extent

    The samples were taken on 7 cruises along the Nansen Legacy Project transect in the Northern Barents Sea.

    Method steps
    1. Please refer to the Nansen Legacy Sampling Protocol: https://arvenetternansen.com/sampling-protocol-collection/

    Metrics

    Contacts

    • Stefan Thiele

      Originator
      Metadata author
      User
      Administrative point of contact
      Organization
      University of Bergen
      Position
      Postdoc
      Address
      Thormohlensgate 53 A/B
      Roles
      Originator
      Metadata author
      User
      Administrative point of contact
      Email
      User ID

    GBIF registration

    Registration date
    March 23, 2023
    Metadata last modified
    March 23, 2023
    Publication date
    March 23, 2023
    Hosted by
    Institute of Marine Research
    Installation
    IMR.NO-IPT
    Endpoints
    Darwin Core Archive
    EML
    Preferred identifier
    10.21335/nmdc-831634754
    Alternative identifiers

    Citation

    Thiele S (2023). Nansen Legacy Bacterial and Archaeal community composition. Version 1.3. The Nansen Legacy Project. Occurrence dataset https://doi.org/10.21335/nmdc-831634754 accessed via GBIF.org on 2024-11-27.
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